Transcript: ENSDART00000133385.2 lrp1ba-201

Description

low density lipoprotein receptor-related protein 1Ba [Source:ZFIN;Acc:ZDB-GENE-050208-608]

Gene Synonyms

lrp1b, si:ch211-181p13.1, si:dkeyp-122a9.3

Location

About this transcript

This transcript has 54 exons, is annotated with 235 domains and features, is associated with 6216 variant alleles and maps to 165 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000180379.1	lrp1ba-202	10077	3358aa	ENSDARP00000151578.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QD80	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000133385.2	lrp1ba-201	8684	2895aa	ENSDARP00000113755.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QTG8	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 54, Coding exons: 54, Transcript length: 8,684 bps, Translation length: 2,895 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000133385.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.