Transcript: ENSDART00000133360.3 CCNY-202

Description

cyclin Y [Source:ZFIN;Acc:ZDB-GENE-091117-45]

Location

Chromosome 24: 4,373,033-4,417,743 forward strand.

About this transcript

This transcript has 9 exons, is annotated with 4 domains and features, is associated with 797 variant alleles and maps to 86 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000063677.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000093256.6	CCNY-203	1050	349aa	ENSDARP00000087688.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F3H3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSDART00000138943.2	CCNY-201	1580	248aa	ENSDARP00000122048.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000179062.2	CCNY-204	1029	342aa	ENSDARP00000143253.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286Y7Z8	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSDART00000133360.3	CCNY-202	974	217aa	ENSDARP00000120108.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 974 bps, Translation length: 217 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000133360.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000133360.3 CCNY-202

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSDART00000133360.3 CCNY-202

Summary

About Us

Get help

Our sister sites

Follow us