Transcript: ENSDART00000133341.2 aar2-202

Description

AAR2 splicing factor [Source:ZFIN;Acc:ZDB-GENE-040704-68]

Gene Synonyms

im:7153138, zgc:92018

Location

About this transcript

This transcript has 3 exons, is annotated with 6 domains and features, is associated with 160 variant alleles and maps to 128 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000014152.7	aar2-201	1438	384aa	ENSDARP00000013455.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R8D9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000170455.2	aar2-203	1517	384aa	ENSDARP00000132833.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R8D9	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000133341.2	aar2-202	895	252aa	ENSDARP00000121479.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QBA9	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 3, Coding exons: 1, Transcript length: 895 bps, Translation length: 252 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000133341.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.