Transcript: ENSDART00000133317.4 amy2al1-202

Description

amylase alpha 2A-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1606]

Location

Chromosome 17: 43,863,756-43,874,249 forward strand.

About this transcript

This transcript has 7 exons, is associated with 803 variant alleles and maps to 227 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000030357.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000134272.2	amy2al1-204	1623	517aa	ENSDARP00000112576.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000167214.2	amy2al1-209	3323	512aa	ENSDARP00000137839.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M2B5V6	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000132673.3	amy2al1-201	942	259aa	ENSDARP00000120480.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000133874.3	amy2al1-203	927	277aa	ENSDARP00000118615.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000140316.3	amy2al1-205	870	259aa	ENSDARP00000122652.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000148090.2	amy2al1-208	444	87aa	ENSDARP00000118621.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000142929.2	amy2al1-206	261	37aa	ENSDARP00000116065.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000145468.3	amy2al1-207	815	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000133317.4	amy2al1-202	998	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 7, Coding exons: 0, Transcript length: 998 bps,

Version

ENSDART00000133317.4

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000133317.4 amy2al1-202

Summary

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Transcript: ENSDART00000133317.4 amy2al1-202

Summary

About Us

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