Transcript: ENSDART00000133308.3 NID1-201

Description

nidogen 1a [Source:ZFIN;Acc:ZDB-GENE-050302-58]

Location

About this transcript

This transcript has 12 exons, is annotated with 54 domains and features, is associated with 712 variant alleles and maps to 184 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000099475.6	NID1-202	7214	1175aa	ENSDARP00000090249.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RAG3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000133308.3	NID1-201	2638	578aa	ENSDARP00000119891.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 2,638 bps, Translation length: 578 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000133308.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.