Transcript: ENSDART00000133165.2 jam2a-201

Description

junctional adhesion molecule 2a [Source:ZFIN;Acc:ZDB-GENE-031204-3]

Gene Synonyms

jam2, jamb, jamb.1, sb:cb1002

Location

About this transcript

This transcript has 4 exons, is annotated with 4 domains and features, is associated with 3 variant alleles and maps to 35 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000166731.2	jam2a-203	924	307aa	ENSDARP00000132646.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IGV4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000135944.3	jam2a-202	707	185aa	ENSDARP00000123569.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QBR0	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000133165.2	jam2a-201	450	98aa	ENSDARP00000117071.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QQJ8	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 450 bps, Translation length: 98 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000133165.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.