Transcript: ENSDART00000133150.2 c1galt1a-202

Description

core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1a [Source:ZFIN;Acc:ZDB-GENE-060503-810]

Location

About this transcript

This transcript has 3 exons, is annotated with 5 domains and features, is associated with 364 variant alleles and maps to 156 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000133150.2	c1galt1a-202	1054	247aa	ENSDARP00000121379.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A3KQK4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000089882.5	c1galt1a-201	744	247aa	ENSDARP00000084315.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A3KQK4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 1,054 bps, Translation length: 247 residues

Version

ENSDART00000133150.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.