Transcript: ENSDART00000133135.3 si:ch211-167j6.3-201

Description

si:ch211-167j6.3 [Source:ZFIN;Acc:ZDB-GENE-070912-145]

Location

About this transcript

This transcript has 5 exons, is annotated with 5 domains and features, is associated with 11 variant alleles and maps to 60 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000133135.3	si:ch211-167j6.3-201	871	169aa	ENSDARP00000117912.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QDJ1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000134415.2	si:ch211-167j6.3-202	502	113aa	ENSDARP00000115985.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M3B2I0	-
ENSDART00000140691.2	si:ch211-167j6.3-203	638	48aa	ENSDARP00000123089.1	Nonsense mediated decay	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 871 bps, Translation length: 169 residues

Version

ENSDART00000133135.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.