Transcript: ENSDART00000133108.2 zswim8-203

Description

zinc finger, SWIM-type containing 8 [Source:NCBI gene (formerly Entrezgene);Acc:100148379]

Location

Chromosome 13: 21,862,050-21,864,714 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 9 domains and features, is associated with 342 variant alleles and maps to 67 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000069397.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000056432.7	zswim8-201	7250	1912aa	ENSDARP00000056431.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8A5T6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000192115.1	zswim8-206	7838	1949aa	ENSDARP00000148174.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000165150.3	zswim8-205	7787	1932aa	ENSDARP00000135040.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IMH7	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSDART00000144612.2	zswim8-204	620	207aa	ENSDARP00000119927.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000133108.2	zswim8-203	588	196aa	ENSDARP00000118391.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000100965.5	zswim8-202	1928	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 588 bps, Translation length: 196 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000133108.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000133108.2 zswim8-203

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Transcript: ENSDART00000133108.2 zswim8-203

Summary

About Us

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