Transcript: ENSDART00000133092.2 st6galnac5a-202

Description

ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5a [Source:ZFIN;Acc:ZDB-GENE-070705-488]

Gene Synonyms

si:dkey-70k13.1, st6galnac5-r2

Location

About this transcript

This transcript has 4 exons, is annotated with 7 domains and features, is associated with 1723 variant alleles and maps to 122 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000057299.7	st6galnac5a-201	1161	325aa	ENSDARP00000057298.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q5Y4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000133092.2	st6galnac5a-202	975	324aa	ENSDARP00000114556.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q0P7H7	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 975 bps, Translation length: 324 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000133092.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.