Transcript: ENSDART00000133081.3 selp-202

Description

selectin P [Source:ZFIN;Acc:ZDB-GENE-110107-2]

Gene Synonyms

si:ch211-260g14.4

Location

About this transcript

This transcript has 14 exons, is annotated with 94 domains and features, is associated with 482 variant alleles and maps to 163 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000061765.5	selp-201	2790	868aa	ENSDARP00000061764.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E5DV48	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000133081.3	selp-202	2611	846aa	ENSDARP00000115465.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QA53	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000141599.2	selp-203	587	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 14, Coding exons: 14, Transcript length: 2,611 bps, Translation length: 846 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000133081.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.