Transcript: ENSDART00000133073.2 rrbp1a-202

Description

ribosome binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9795]

Gene Synonyms

cb360, sb:cb360, si:dkey-76k16.7, wu:fa66b07, wu:fb58g03, zgc:171356

Location

About this transcript

This transcript has 29 exons, is annotated with 56 domains and features, is associated with 370 variant alleles and maps to 300 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000133073.2	rrbp1a-202	4674	1336aa	ENSDARP00000118039.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8A4D7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000138181.3	rrbp1a-203	2452	391aa	ENSDARP00000120512.1	Nonsense mediated decay	E9QFY1	-
ENSDART00000132173.2	rrbp1a-201	527	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000139153.2	rrbp1a-204	495	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 29, Coding exons: 28, Transcript length: 4,674 bps, Translation length: 1,336 residues

Version

ENSDART00000133073.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.