Transcript: ENSDART00000133048.3 nbr1a-201

Description

NBR1 autophagy cargo receptor a [Source:ZFIN;Acc:ZDB-GENE-030131-9112]

Gene Synonyms

fa99f08, nbr1, wu:fa99f08

Location

About this transcript

This transcript has 21 exons, is annotated with 33 domains and features, is associated with 234 variant alleles and maps to 202 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000133048.3	nbr1a-201	4136	989aa	ENSDARP00000121070.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QEG9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000142025.2	nbr1a-203	454	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000138141.2	nbr1a-202	4359	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 21, Coding exons: 21, Transcript length: 4,136 bps, Translation length: 989 residues

Version

ENSDART00000133048.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.