Transcript: ENSDART00000132955.2 si:ch211-106h4.9-202

Description

si:ch211-106h4.9 [Source:ZFIN;Acc:ZDB-GENE-070705-17]

Location

Chromosome 2: 31,641,765-31,651,297 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 5 domains and features, is associated with 385 variant alleles and maps to 106 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000075706.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000111810.4	si:ch211-106h4.9-201	8335	1173aa	ENSDARP00000099673.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R8E9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000190546.1	si:ch211-106h4.9-206	3288	548aa	ENSDARP00000153099.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8RUH1	-
ENSDART00000144383.3	si:ch211-106h4.9-204	989	312aa	ENSDARP00000114689.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0A0MPQ9	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000135668.2	si:ch211-106h4.9-203	578	193aa	ENSDARP00000117301.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QP92	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000132955.2	si:ch211-106h4.9-202	478	159aa	ENSDARP00000112672.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6PDE3	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000145505.2	si:ch211-106h4.9-205	759	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 478 bps, Translation length: 159 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000132955.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000132955.2 si:ch211-106h4.9-202

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSDART00000132955.2 si:ch211-106h4.9-202

Summary

About Us

Get help

Our sister sites

Follow us