Transcript: ENSDART00000132920.3 slc35h1-203

Description

solute carrier family 35 member H1 [Source:ZFIN;Acc:ZDB-GENE-030131-2202]

Gene Synonyms

slc35c2, wu:fb99e07, wu:fc49g11, wu:fi09e02, zgc:55285, zgc:77328

Location

Chromosome 23: 20,431,388-20,511,954 forward strand.

About this transcript

This transcript has 50 exons, is annotated with 111 domains and features, is associated with 2107 variant alleles and maps to 275 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000037517.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000109899.4	slc35h1-202	2298	362aa	ENSDARP00000104003.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R7R7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000132920.3	slc35h1-203	7430	1897aa	ENSDARP00000113029.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000102963.5	slc35h1-201	7336	1816aa	ENSDARP00000093738.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000193950.1	slc35h1-206	5553	362aa	ENSDARP00000157391.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R7R7	-
ENSDART00000140219.2	slc35h1-205	838	187aa	ENSDARP00000120995.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000137294.2	slc35h1-204	714	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 50, Coding exons: 49, Transcript length: 7,430 bps, Translation length: 1,897 residues

Version

ENSDART00000132920.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

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Transcript: ENSDART00000132920.3 slc35h1-203

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Transcript: ENSDART00000132920.3 slc35h1-203

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