Transcript: ENSDART00000132899.3 cacna1ea-202

Description

calcium channel, voltage-dependent, R type, alpha 1E subunit a [Source:ZFIN;Acc:ZDB-GENE-081104-526]

Gene Synonyms

cacna1r, cacna1rea, si:dkey-21p1.1

Location

About this transcript

This transcript has 18 exons, is annotated with 29 domains and features, is associated with 1267 variant alleles and maps to 57 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000089971.6	cacna1ea-201	5382	1793aa	ENSDARP00000084404.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4I9E2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000139972.2	cacna1ea-203	2547	849aa	ENSDARP00000119560.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0J9YIY1	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000132899.3	cacna1ea-202	2224	741aa	ENSDARP00000123541.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0UYF7	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 18, Coding exons: 18, Transcript length: 2,224 bps, Translation length: 741 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000132899.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.