Transcript: ENSDART00000132882.3 rpl17-202

Description

ribosomal protein L17 [Source:ZFIN;Acc:ZDB-GENE-030131-8585]

Gene Synonyms

fa91a06, wu:fa91a06, wu:fa99c06, zgc:65996

Location

Chromosome 21: 19,061,766-19,067,515 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 14 domains and features, is associated with 274 variant alleles and maps to 110 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000057556.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000132882.3	rpl17-202	825	184aa	ENSDARP00000119756.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7T1K0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000187931.1	rpl17-206	1279	184aa	ENSDARP00000145162.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7T1K0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000145591.3	rpl17-205	924	155aa	ENSDARP00000115184.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000134746.2	rpl17-203	630	184aa	ENSDARP00000122841.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7T1K0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000131366.3	rpl17-201	625	184aa	ENSDARP00000113553.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7T1K0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000140583.3	rpl17-204	691	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 825 bps, Translation length: 184 residues

Version

ENSDART00000132882.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

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Transcript: ENSDART00000132882.3 rpl17-202

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Transcript: ENSDART00000132882.3 rpl17-202

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