Transcript: ENSDART00000132862.3 si:ch211-225k7.3-202

Description

si:ch211-225k7.3 [Source:ZFIN;Acc:ZDB-GENE-060503-876]

Location

About this transcript

This transcript has 5 exons, is annotated with 20 domains and features and maps to 285 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000144873.3	si:ch211-225k7.3-203	1080	359aa	ENSDARP00000119152.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QBB4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000108557.3	si:ch211-225k7.3-201	1218	226aa	ENSDARP00000102676.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A5WUG9	-
ENSDART00000132862.3	si:ch211-225k7.3-202	1115	356aa	ENSDARP00000114035.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A3QJT9	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 1,115 bps, Translation length: 356 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000132862.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.