Transcript: ENSDART00000132861.3 cab39l-202

Description

calcium binding protein 39-like [Source:ZFIN;Acc:ZDB-GENE-041114-204]

Gene Synonyms

fc52g02, wu:fc52g02, zgc:92575

Location

About this transcript

This transcript has 6 exons, is annotated with 5 domains and features, is associated with 88 variant alleles and maps to 116 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000053240.6	cab39l-201	3012	334aa	ENSDARP00000053239.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5U373	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000132861.3	cab39l-202	1238	181aa	ENSDARP00000120572.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8A4Q7	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 6, Coding exons: 4, Transcript length: 1,238 bps, Translation length: 181 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000132861.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.