Transcript: ENSDART00000132835.2 pax1b-201

Description

paired box 1b [Source:ZFIN;Acc:ZDB-GENE-060503-372]

Gene Synonyms

si:dkeyp-50f5.1

Location

About this transcript

This transcript has 5 exons, is annotated with 18 domains and features, is associated with 252 variant alleles and maps to 147 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000185195.1	pax1b-203	3407	353aa	ENSDARP00000146188.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000184898.1	pax1b-202	4794	337aa	ENSDARP00000146219.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000132835.2	pax1b-201	1659	340aa	ENSDARP00000121471.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0S7C8	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 1,659 bps, Translation length: 340 residues

Version

ENSDART00000132835.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.