Transcript: ENSDART00000132778.2 swap70b-202

Description

switching B cell complex subunit SWAP70b [Source:ZFIN;Acc:ZDB-GENE-030131-3587]

Gene Synonyms

fc45f07, si:dkey-8l13.4, wu:fc45f07

Location

About this transcript

This transcript has 3 exons, is annotated with 5 domains and features, is associated with 344 variant alleles and maps to 94 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000100105.6	swap70b-201	2558	588aa	ENSDARP00000090877.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1LYE0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000146464.2	swap70b-203	670	192aa	ENSDARP00000114130.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1LYD9	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000132778.2	swap70b-202	552	154aa	ENSDARP00000119136.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1LYD8	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 552 bps, Translation length: 154 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000132778.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.