Transcript: ENSDART00000132777.2 IFT20-202

Description

intraflagellar transport 20 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-040614-2]

Location

Chromosome 15: 23,784,859-23,789,828 forward strand.

About this transcript

This transcript has 4 exons, is associated with 5 variant alleles and maps to 202 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000040556.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000192889.1	IFT20-203	1116	132aa	ENSDARP00000145296.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4I9H0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000138375.2	IFT20-201	1104	132aa	ENSDARP00000121802.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4I9H0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000181482.1	IFT20-204	488	132aa	ENSDARP00000147020.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4I9H0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000132777.2	IFT20-202	818	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 818 bps,

Version

ENSDART00000132777.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000132777.2 IFT20-202

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Transcript: ENSDART00000132777.2 IFT20-202

Summary

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