Transcript: ENSDART00000132776.2 pdgfba-202

Description

platelet-derived growth factor beta polypeptide a [Source:ZFIN;Acc:ZDB-GENE-050208-525]

Location

About this transcript

This transcript has 5 exons, is annotated with 25 domains and features, is associated with 4 variant alleles and maps to 174 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000186351.1	pdgfba-203	2516	463aa	ENSDARP00000146148.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M9Q3E7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000121599.3	pdgfba-201	1736	434aa	ENSDARP00000108907.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000132776.2	pdgfba-202	1195	265aa	ENSDARP00000123272.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 1,195 bps, Translation length: 265 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000132776.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.