Transcript: ENSDART00000132726.3 whrnb-202

Description

whirlin b [Source:ZFIN;Acc:ZDB-GENE-060526-377]

Gene Synonyms

dfnb31b, si:rp71-10d23.1

Location

About this transcript

This transcript has 5 exons, is annotated with 9 domains and features, is associated with 1664 variant alleles and maps to 39 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000144802.3	whrnb-203	7982	946aa	ENSDARP00000119523.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R807	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000087197.6	whrnb-201	3400	886aa	ENSDARP00000081631.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R0L2	-
ENSDART00000132726.3	whrnb-202	718	174aa	ENSDARP00000130359.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4I9P6	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 718 bps, Translation length: 174 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000132726.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.