Transcript: ENSDART00000132677.3 atg9a-202

Description

ATG9 autophagy related 9 homolog A (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-070209-65]

Gene Synonyms

zgc:158700

Location

Chromosome 6: 11,250,042-11,253,706 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 12 domains and features, is associated with 219 variant alleles and maps to 47 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000044551.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000065411.7	atg9a-201	3116	846aa	ENSDARP00000065410.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QCA8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000193287.1	atg9a-205	6033	871aa	ENSDARP00000147795.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000186547.1	atg9a-204	5168	846aa	ENSDARP00000148935.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QCA8	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000132677.3	atg9a-202	738	162aa	ENSDARP00000113997.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000137122.2	atg9a-203	539	99aa	ENSDARP00000122261.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 7, Coding exons: 5, Transcript length: 738 bps, Translation length: 162 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000132677.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

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Transcript: ENSDART00000132677.3 atg9a-202

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Transcript: ENSDART00000132677.3 atg9a-202

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