Transcript: ENSDART00000132667.4 si:ch211-213a13.2-204

Description

si:ch211-213a13.2 [Source:ZFIN;Acc:ZDB-GENE-050208-551]

Gene Synonyms

si:ch211-213a13.10

Location

Chromosome 22: 9,009,496-9,057,108 forward strand.

About this transcript

This transcript has 48 exons, is annotated with 162 domains and features, is associated with 728 variant alleles and maps to 414 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000093024.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000132667.4	si:ch211-213a13.2-204	8903	2849aa	ENSDARP00000118221.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QLB9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000171839.2	si:ch211-213a13.2-205	2671	624aa	ENSDARP00000137859.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0N4SU76	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000184601.1	si:ch211-213a13.2-206	1998	407aa	ENSDARP00000149523.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8Q8T4	-
ENSDART00000188929.1	si:ch211-213a13.2-208	1998	234aa	ENSDARP00000147505.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8Q338	-
ENSDART00000184966.1	si:ch211-213a13.2-207	1722	299aa	ENSDARP00000146190.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8Q135	-
ENSDART00000192625.1	si:ch211-213a13.2-209	1717	315aa	ENSDARP00000146385.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8RJB7	-

Summary

Statistics

Exons: 48, Coding exons: 47, Transcript length: 8,903 bps, Translation length: 2,849 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000132667.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000132667.4 si:ch211-213a13.2-204

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSDART00000132667.4 si:ch211-213a13.2-204

Summary

About Us

Get help

Our sister sites

Follow us