Transcript: ENSDART00000132667.4 si:ch211-213a13.2-201

Description

si:ch211-213a13.2 [Source:ZFIN;Acc:ZDB-GENE-050208-551]

Location

Chromosome 22: 9,009,496-9,057,108 forward strand.

About this transcript

This transcript has 48 exons, is annotated with 167 domains and features, is associated with 728 variant alleles and maps to 414 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000093024.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000132667.4	si:ch211-213a13.2-201	8903	2849aa	ENSDARP00000118221.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000171839.2	si:ch211-213a13.2-202	2671	624aa	ENSDARP00000137859.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000184601.1	si:ch211-213a13.2-203	1998	407aa	ENSDARP00000149523.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000188929.1	si:ch211-213a13.2-205	1998	234aa	ENSDARP00000147505.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000184966.1	si:ch211-213a13.2-204	1722	299aa	ENSDARP00000146190.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000192625.1	si:ch211-213a13.2-206	1717	315aa	ENSDARP00000146385.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-

Summary

Statistics

Exons: 48, Coding exons: 47, Transcript length: 8,903 bps, Translation length: 2,849 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000132667.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000132667.4 si:ch211-213a13.2-201

Summary

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Transcript: ENSDART00000132667.4 si:ch211-213a13.2-201

Summary

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