Transcript: ENSDART00000132662.3 STMN1-203

Description

stathmin 1a [Source:ZFIN;Acc:ZDB-GENE-031006-14]

Location

About this transcript

This transcript has 5 exons, is associated with 139 variant alleles and maps to 137 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000007906.11	STMN1-201	1083	148aa	ENSDARP00000023151.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1RLQ1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000164683.3	STMN1-204	3914	163aa	ENSDARP00000133564.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000151228.2	STMN1-202	221	51aa	ENSDARP00000125747.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000132662.3	STMN1-203	839	73aa	ENSDARP00000125979.1	Nonsense mediated decay	-	-

Summary

Statistics

Exons: 5, Coding exons: 3, Transcript length: 839 bps, Translation length: 73 residues

Version

ENSDART00000132662.3

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.