Transcript: ENSDART00000132637.2 RAB34-202

Description

RAB34, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-041010-197]

Location

Chromosome 15: 15,460,609-15,469,079 reverse strand.

About this transcript

This transcript has 11 exons, is annotated with 19 domains and features, is associated with 519 variant alleles and maps to 97 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000045628.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000004220.7	RAB34-201	1584	260aa	ENSDARP00000012152.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5XJS4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000132637.2	RAB34-202	929	241aa	ENSDARP00000120109.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000161192.2	RAB34-204	785	260aa	ENSDARP00000138392.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5XJS4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000131259.2	RAB34-203	820	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 11, Coding exons: 10, Transcript length: 929 bps, Translation length: 241 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000132637.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000132637.2 RAB34-202

Summary

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Transcript: ENSDART00000132637.2 RAB34-202

Summary

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