Transcript: ENSDART00000132516.2 ELAVL2-202

Description

ELAV like neuron-specific RNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040704-9]

Location

Chromosome 22: 38,253,199-38,258,053 reverse strand.

About this transcript

This transcript has 2 exons, is annotated with 9 domains and features, is associated with 375 variant alleles and maps to 223 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000040732.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000179786.1	ELAVL2-203	2539	389aa	ENSDARP00000157308.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8S0A2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSDART00000015117.10	ELAVL2-204	1691	360aa	ENSDARP00000006457.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6GQM6	-
ENSDART00000139420.3	ELAVL2-201	1689	388aa	ENSDARP00000114220.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSDART00000132516.2	ELAVL2-202	522	174aa	ENSDARP00000121083.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 522 bps, Translation length: 174 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000132516.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000132516.2 ELAVL2-202

Summary

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Transcript: ENSDART00000132516.2 ELAVL2-202

Summary

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