Transcript: ENSDART00000132484.3 slc6a22.1-203

Description

solute carrier family 6 member 22, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030616-629]

Location

Chromosome 6: 41,118,927-41,138,855 reverse strand.

About this transcript

This transcript has 16 exons, is annotated with 54 domains and features, is associated with 395 variant alleles and maps to 190 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000000730.14 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000132484.3	slc6a22.1-203	2735	575aa	ENSDARP00000120523.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q801U6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000001861.9	slc6a22.1-201	2485	575aa	ENSDARP00000001971.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q801U6	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000128723.3	slc6a22.1-202	1570	168aa	ENSDARP00000111385.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000151055.3	slc6a22.1-204	1551	167aa	ENSDARP00000125706.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 16, Coding exons: 14, Transcript length: 2,735 bps, Translation length: 575 residues

Version

ENSDART00000132484.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000132484.3 slc6a22.1-203

Summary

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Transcript: ENSDART00000132484.3 slc6a22.1-203

Summary

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