Transcript: ENSDART00000132465.2 dop1b-203

Description

DOP1 leucine zipper like protein B [Source:ZFIN;Acc:ZDB-GENE-040426-1195]

Gene Synonyms

dopey2, wu:fc27d12, zgc:63622

Location

Chromosome 9: 33,154,841-33,169,215 forward strand.

About this transcript

This transcript has 13 exons, is annotated with 4 domains and features, is associated with 175 variant alleles and maps to 147 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000055857.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000131910.2	dop1b-202	5553	1485aa	ENSDARP00000112906.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000078256.5	dop1b-201	3417	1138aa	ENSDARP00000072718.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000132465.2	dop1b-203	1749	542aa	ENSDARP00000120069.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000180786.1	dop1b-205	513	170aa	ENSDARP00000153454.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000147046.2	dop1b-204	432	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-

Summary

Statistics

Exons: 13, Coding exons: 12, Transcript length: 1,749 bps, Translation length: 542 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000132465.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

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Transcript: ENSDART00000132465.2 dop1b-203

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Transcript: ENSDART00000132465.2 dop1b-203

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