Transcript: ENSDART00000132458.3 ZFYVE21-202

Description

zinc finger, FYVE domain containing 21 [Source:ZFIN;Acc:ZDB-GENE-030131-1296]

Location

Chromosome 13: 43,639,959-43,656,324 forward strand.

About this transcript

This transcript has 6 exons, is associated with 526 variant alleles and maps to 114 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000027887.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000042588.8	ZFYVE21-206	1447	226aa	ENSDARP00000042587.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8A6I1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000074728.7	ZFYVE21-201	1418	243aa	ENSDARP00000069214.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8A6I2	-
ENSDART00000141024.2	ZFYVE21-204	407	103aa	ENSDARP00000118729.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000132458.3	ZFYVE21-202	649	48aa	ENSDARP00000120627.1	Nonsense mediated decay	-	-
ENSDART00000074738.6	ZFYVE21-203	928	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000140473.2	ZFYVE21-205	835	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 6, Coding exons: 1, Transcript length: 649 bps, Translation length: 48 residues

Version

ENSDART00000132458.3

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000132458.3 ZFYVE21-202

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSDART00000132458.3 ZFYVE21-202

Summary

About Us

Get help

Our sister sites

Follow us