Transcript: ENSDART00000132329.3 STX17-201

Description

syntaxin 17 [Source:ZFIN;Acc:ZDB-GENE-041114-164]

Location

About this transcript

This transcript has 8 exons, is annotated with 15 domains and features, is associated with 10 variant alleles and maps to 139 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000132329.3	STX17-201	1572	292aa	ENSDARP00000114720.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QFP8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000136256.2	STX17-202	665	168aa	ENSDARP00000113713.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 8, Coding exons: 7, Transcript length: 1,572 bps, Translation length: 292 residues

Version

ENSDART00000132329.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.