Transcript: ENSDART00000132299.2 rpl13a-202

Description

ribosomal protein L13a [Source:ZFIN;Acc:ZDB-GENE-030131-168]

Gene Synonyms

fd05d08, hm:zehp0384, wu:fa95e06, wu:fb08g07, wu:fd05d08

Location

Chromosome 17: 24,615,181-24,616,295 forward strand.

About this transcript

This transcript has 3 exons, is associated with 191 variant alleles and maps to 246 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000044093.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000064739.5	rpl13a-201	1123	205aa	ENSDARP00000064738.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1LYB7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000145980.3	rpl13a-206	905	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000141942.2	rpl13a-205	918	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000134680.2	rpl13a-204	831	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000134571.2	rpl13a-203	581	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000132299.2	rpl13a-202	371	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 371 bps,

Version

ENSDART00000132299.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

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Transcript: ENSDART00000132299.2 rpl13a-202

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Transcript: ENSDART00000132299.2 rpl13a-202

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