Transcript: ENSDART00000132295.4 rnf17-201

Description

ring finger protein 17 [Source:ZFIN;Acc:ZDB-GENE-030131-6451]

Gene Synonyms

TDRD4, im:7147535, wu:fj98c04

Location

About this transcript

This transcript has 37 exons, is annotated with 44 domains and features, is associated with 74 variant alleles and maps to 260 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000176057.2	rnf17-202	5055	1521aa	ENSDARP00000144505.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R3C5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000132295.4	rnf17-201	4905	1521aa	ENSDARP00000116232.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R3C5	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 37, Coding exons: 36, Transcript length: 4,905 bps, Translation length: 1,521 residues

Version

ENSDART00000132295.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.