Transcript: ENSDART00000132227.2 eif4h-201

Description

eukaryotic translation initiation factor 4h [Source:ZFIN;Acc:ZDB-GENE-010328-19]

Gene Synonyms

wbscr1, zgc:77282

Location

Chromosome 15: 4,586,251-4,596,623 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 6 domains and features, is associated with 329 variant alleles and maps to 167 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000042252.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000144949.4	eif4h-202	2440	256aa	ENSDARP00000117924.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QYM4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000160191.2	eif4h-203	2211	262aa	ENSDARP00000131876.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IG09	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000161721.2	eif4h-204	2046	207aa	ENSDARP00000130536.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4ICV9	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000132227.2	eif4h-201	877	125aa	ENSDARP00000119123.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 877 bps, Translation length: 125 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000132227.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Upcoming Ensembl Platform Transition

Transcript: ENSDART00000132227.2 eif4h-201

Summary

About Us

Get help

Our sister sites

Follow us

Upcoming Ensembl Platform Transition

Favourite species

All species

Recent locations

Transcript: ENSDART00000132227.2 eif4h-201

Summary

About Us

Get help

Our sister sites

Follow us