Transcript: ENSDART00000132213.2 nkain1-202

Description

sodium/potassium transporting ATPase interacting 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1472]

Gene Synonyms

zgc:65908

Location

Chromosome 19: 43,017,931-43,026,832 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 14 domains and features, is associated with 245 variant alleles and maps to 73 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000006859.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000015632.9	nkain1-201	1884	207aa	ENSDARP00000003013.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6PHL4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000182608.1	nkain1-204	6022	207aa	ENSDARP00000148785.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6PHL4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000132213.2	nkain1-202	966	153aa	ENSDARP00000112700.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000150901.2	nkain1-203	901	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 966 bps, Translation length: 153 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000132213.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

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Transcript: ENSDART00000132213.2 nkain1-202

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Transcript: ENSDART00000132213.2 nkain1-202

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