Transcript: ENSDART00000132176.2 wdr35-202

Description

WD repeat domain 35 [Source:ZFIN;Acc:ZDB-GENE-060810-148]

Gene Synonyms

im:7159945, si:ch211-206k20.4

Location

About this transcript

This transcript has 5 exons, is associated with 352 variant alleles and maps to 41 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000100663.6	wdr35-201	4088	1203aa	ENSDARP00000091436.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B7ZD88	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000140099.2	wdr35-203	800	213aa	ENSDARP00000119956.1	Nonsense mediated decay	F1R7T0	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000132176.2	wdr35-202	865	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000144832.2	wdr35-204	584	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 865 bps,

Version

ENSDART00000132176.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.