Transcript: ENSDART00000132161.4 GNPAT-201

Description

si:ch73-21k16.5 [Source:ZFIN;Acc:ZDB-GENE-030131-8374]

Gene Synonyms

fb10c10, wu:fb10c10

Location

Chromosome 20: 46,924,390-46,946,574 forward strand.

About this transcript

This transcript has 16 exons, is annotated with 12 domains and features, is associated with 557 variant alleles and maps to 86 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000078770.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000132161.4	GNPAT-201	2351	681aa	ENSDARP00000118109.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8JM22	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000192531.1	GNPAT-202	1953	650aa	ENSDARP00000155652.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QK16	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 16, Coding exons: 16, Transcript length: 2,351 bps, Translation length: 681 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000132161.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000132161.4 GNPAT-201

Summary

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Transcript: ENSDART00000132161.4 GNPAT-201

Summary

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