Transcript: ENSDART00000132141.2 btbd3a-202

Description

BTB (POZ) domain containing 3a [Source:ZFIN;Acc:ZDB-GENE-090312-7]

Gene Synonyms

btbd3, si:dkey-210m15.6

Location

About this transcript

This transcript has 5 exons, is annotated with 12 domains and features, is associated with 235 variant alleles and maps to 138 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000014970.10	btbd3a-201	2076	461aa	ENSDARP00000012365.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8JKQ2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000132141.2	btbd3a-202	885	263aa	ENSDARP00000118034.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8JKQ3	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000132244.3	btbd3a-203	540	130aa	ENSDARP00000123626.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8JKQ4	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 885 bps, Translation length: 263 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000132141.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.