Transcript: ENSDART00000132139.3 UFD1-201

Description

ubiquitin recognition factor in ER associated degradation 1 [Source:ZFIN;Acc:ZDB-GENE-040718-150]

Location

About this transcript

This transcript has 5 exons, is annotated with 3 domains and features, is associated with 216 variant alleles and maps to 120 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000034968.9	UFD1-203	1308	308aa	ENSDARP00000035108.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6DRD5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000132139.3	UFD1-201	836	100aa	ENSDARP00000115288.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000137252.3	UFD1-202	666	148aa	ENSDARP00000118492.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000143139.2	UFD1-204	627	99aa	ENSDARP00000120767.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000182894.1	UFD1-205	303	100aa	ENSDARP00000148570.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 836 bps, Translation length: 100 residues

Version

ENSDART00000132139.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.