Transcript: ENSDART00000132058.2 zgc:113314-201

Description

zgc:113314 [Source:ZFIN;Acc:ZDB-GENE-050913-19]

Location

Chromosome 9: 30,421,626-30,426,582 forward strand.

About this transcript

This transcript has 8 exons, is annotated with 1 domain and feature, is associated with 159 variant alleles and maps to 107 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000069453.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000145025.3	zgc:113314-203	1436	247aa	ENSDARP00000120117.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0S6Z6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000132058.2	zgc:113314-201	873	214aa	ENSDARP00000123174.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000134868.2	zgc:113314-202	732	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 8, Coding exons: 7, Transcript length: 873 bps, Translation length: 214 residues

Version

ENSDART00000132058.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000132058.2 zgc:113314-201

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Transcript: ENSDART00000132058.2 zgc:113314-201

Summary

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