Transcript: ENSDART00000132032.3 IFT88-202

Description

intraflagellar transport 88 homolog [Source:ZFIN;Acc:ZDB-GENE-030131-574]

Location

About this transcript

This transcript has 4 exons, is annotated with 4 domains and features, is associated with 109 variant alleles and maps to 168 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000038923.8	IFT88-201	2941	824aa	ENSDARP00000034047.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000110943.5	IFT88-204	3431	855aa	ENSDARP00000101727.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000188129.1	IFT88-205	3386	840aa	ENSDARP00000150029.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000193876.1	IFT88-203	2388	795aa	ENSDARP00000155661.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000132032.3	IFT88-202	602	109aa	ENSDARP00000122577.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 602 bps, Translation length: 109 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000132032.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.