Transcript: ENSDART00000132018.2 cstf1-203

Description

cleavage stimulation factor, 3' pre-RNA, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2958]

Gene Synonyms

fc22d10, wu:fc22d10, wu:fd16h09, zgc:66207, zgc:77560

Location

Chromosome 11: 27,821,029-27,827,467 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 7 domains and features, is associated with 101 variant alleles and maps to 278 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000044820.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000121847.4	cstf1-201	2053	431aa	ENSDARP00000109556.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QFK9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000130800.4	cstf1-202	2598	431aa	ENSDARP00000111131.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QFK9	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000145744.3	cstf1-205	964	253aa	ENSDARP00000121074.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000134677.3	cstf1-204	851	262aa	ENSDARP00000114660.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000132018.2	cstf1-203	705	170aa	ENSDARP00000116178.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 705 bps, Translation length: 170 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000132018.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

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Transcript: ENSDART00000132018.2 cstf1-203

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Transcript: ENSDART00000132018.2 cstf1-203

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