Transcript: ENSDART00000131996.2 chl1a-202

Description

cell adhesion molecule L1-like a [Source:ZFIN;Acc:ZDB-GENE-090313-201]

Gene Synonyms

camel, hm:zeh0266, si:dkey-177g18.2, zeh0266

Location

Chromosome 23: 11,347,436-11,374,684 forward strand.

About this transcript

This transcript has 3 exons, is associated with 667 variant alleles and maps to 71 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000077881.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000135406.3	chl1a-203	4565	1153aa	ENSDARP00000116141.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QCF0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000111028.3	chl1a-201	8097	1153aa	ENSDARP00000103902.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QCF0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000163083.2	chl1a-204	4415	1153aa	ENSDARP00000136700.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QCF0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000131996.2	chl1a-202	370	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 370 bps,

Version

ENSDART00000131996.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

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Transcript: ENSDART00000131996.2 chl1a-202

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Transcript: ENSDART00000131996.2 chl1a-202

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