Transcript: ENSDART00000131973.2 lrmp-201

Description

lymphoid-restricted membrane protein [Source:NCBI gene;Acc:567234]

Gene Synonyms

fi05h08, fue, futile cycle, si:dkey-172o10.2, si:dkey-172o10.4, wu:fi05h08

Location

Chromosome 4: 17,253,609-17,257,435 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 13 domains and features, is associated with 161 variant alleles and maps to 181 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000045574.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000135730.4	lrmp-202	5910	1447aa	ENSDARP00000118448.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5RHB5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000178686.2	lrmp-205	4974	1418aa	ENSDARP00000143787.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286Y9C0 Q5RHB5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000131973.2	lrmp-201	1069	217aa	ENSDARP00000116535.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R1K3	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000147853.2	lrmp-204	814	271aa	ENSDARP00000121715.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R3P6	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000145513.2	lrmp-203	819	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 1,069 bps, Translation length: 217 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000131973.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000131973.2 lrmp-201

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSDART00000131973.2 lrmp-201

Summary

About Us

Get help

Our sister sites

Follow us