Transcript: ENSDART00000131944.2 tagln3b-202

Description

transgelin 3b [Source:ZFIN;Acc:ZDB-GENE-030131-4199]

Gene Synonyms

fc80d07, tagln3, wu:fc80d07, zgc:66052

Location

About this transcript

This transcript has 5 exons, is annotated with 25 domains and features, is associated with 399 variant alleles and maps to 150 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000113092.5	tagln3b-201	5365	289aa	ENSDARP00000101853.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F9Y7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000186061.1	tagln3b-203	1714	228aa	ENSDARP00000147134.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000187846.1	tagln3b-204	1654	199aa	ENSDARP00000147917.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6P697	-
ENSDART00000131944.2	tagln3b-202	1522	199aa	ENSDARP00000116441.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6P697	-

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 1,522 bps, Translation length: 199 residues

Version

ENSDART00000131944.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.