Transcript: ENSDART00000131886.2 SLC25A48-201

Description

solute carrier family 25 member 48 [Source:ZFIN;Acc:ZDB-GENE-040718-60]

Location

About this transcript

This transcript has 5 exons, is associated with 1 variant allele and maps to 96 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000040955.5	SLC25A48-203	1551	309aa	ENSDARP00000040954.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6DHS9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000131886.2	SLC25A48-201	841	63aa	ENSDARP00000142062.1	Nonsense mediated decay	-	-
ENSDART00000137948.2	SLC25A48-202	921	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 841 bps, Translation length: 63 residues

Version

ENSDART00000131886.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.