Transcript: ENSDART00000131865.3 sgce-202

Description

sarcoglycan, epsilon [Source:ZFIN;Acc:ZDB-GENE-030724-1]

Gene Synonyms

zgc:92318

Location

About this transcript

This transcript has 5 exons, is annotated with 2 domains and features, is associated with 49 variant alleles and maps to 166 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000111982.4	sgce-201	1716	414aa	ENSDARP00000099762.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6DHH1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000193142.1	sgce-204	1457	405aa	ENSDARP00000156933.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000151120.2	sgce-203	821	154aa	ENSDARP00000125827.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000131865.3	sgce-202	695	122aa	ENSDARP00000113758.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 695 bps, Translation length: 122 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000131865.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.