Transcript: ENSDART00000131837.2 chd8-202

Description

chromodomain helicase DNA binding protein 8 [Source:NCBI gene;Acc:568214]

Gene Synonyms

si:ch211-10e2.6, wu:fi45h08

Location

About this transcript

This transcript has 36 exons, is annotated with 59 domains and features, is associated with 626 variant alleles and maps to 113 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000013676.9	chd8-201	8822	2555aa	ENSDARP00000011455.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FH24	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000131837.2	chd8-202	7389	2231aa	ENSDARP00000122217.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QW70	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 36, Coding exons: 36, Transcript length: 7,389 bps, Translation length: 2,231 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000131837.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.